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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6005113 chr22:27037014 C/T SELO chr22:50639408-50656045:+ -0.68 -9.42 1.96E-19 Box Plot
THCA rs6005113 chr22:27037014 C/T SF3A1 chr22:30727977-30752936:- -0.66 -8.71 4.94E-17 Box Plot
THCA rs6005113 chr22:27037014 C/T SFI1 chr22:31884674-32014572:+ -0.6 -7.33 9.67E-13 Box Plot
THCA rs6005113 chr22:27037014 C/T SGSM3 chr22:40766595-40806293:+ -0.6 -7.88 2.26E-14 Box Plot
THCA rs6005113 chr22:27037014 C/T SH3BP1 chr22:38030661-38062939:+ -0.44 -6.87 2.03E-11 Box Plot
THCA rs6005113 chr22:27037014 C/T SLC16A11 chr17:6944949-6947242:- 0.56 6.59 1.15E-10 Box Plot
THCA rs6005113 chr22:27037014 C/T SLC25A17 chr22:41165634-41215403:- -0.81 -8.8 2.54E-17 Box Plot
THCA rs6005113 chr22:27037014 C/T SLC2A11 chr22:24198890-24228496:+ -0.91 -8.45 3.45E-16 Box Plot
THCA rs6005113 chr22:27037014 C/T SMARCB1 chr22:24129150-24176703:+ -0.9 -9.3 4.94E-19 Box Plot
THCA rs6005113 chr22:27037014 C/T SMCR7L chr22:39896105-39914136:+ -0.91 -11.66 8.3E-28 Box Plot
THCA rs6005113 chr22:27037014 C/T SNAP29 chr22:21213271-21245506:+ -0.74 -6.39 3.89E-10 Box Plot
THCA rs6005113 chr22:27037014 C/T SNRPD3 chr22:24951471-25005947:+ -0.84 -10.1 7.21E-22 Box Plot
THCA rs6005113 chr22:27037014 C/T SREBF2 chr22:42229083-42303312:+ -0.67 -6.81 2.92E-11 Box Plot
THCA rs6005113 chr22:27037014 C/T ST13 chr22:41220539-41253026:- -1 -11.76 3.07E-28 Box Plot
THCA rs6005113 chr22:27037014 C/T TAB1 chr22:39795746-39833065:+ -0.95 -9.39 2.5E-19 Box Plot